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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37388758_37389925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37388758 - 37389925

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTTCAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTATA

Flanking Amino Acid:

FVVSSDFCHWGQRFRYSYYD

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.3

0.68

79.2

38.4

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

60.3

0.32

1.8

75.84

35.2

Associated Gene:

Gene:

MEMO1

Ensembl Gene ID:

ENSAPLG00000005693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042302

37379543 - 37396859

17317

ENSAPLT00000017359

37379156 - 37397023

17868

ENSAPLT00000005913

37382457 - 37397023

14567