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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37395429_37396727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37395429 - 37396727

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

AAACTCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

GRHPIGVLLNAINELQKNGM

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.9

0.38

0.9

62.9

38.4

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

MEMO1

Ensembl Gene ID:

ENSAPLG00000005693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005913

37382457 - 37397023

14567

ENSAPLT00000042302

37379543 - 37396859

17317

ENSAPLT00000017359

37379156 - 37397023

17868