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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37495153_37498325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37495153 - 37498325

Intron Length:

3173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TAAATGTTAACT

Flanking Amino Acid:

VVKAVVLPGRVTGIEPIINH

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

78.9

0.65

0.8

73.9

31.2

Minor 5ss

-0.6

2.5

52.7

Minor BPS

55.4

0.25

2.1

74.59

41.8

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080