Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_37499482_37500641_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37499482 - 37500641

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTAAACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTTTAAAC

Flanking Amino Acid:

SLWNMKTLKKEYHSQLEGGR

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

66.4

45.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.47

0.9

64.1

37.7

Minor 5ss

36.4

-1.5

2.7

40.1

Minor BPS

77.1

0.83

1.2

81.02

32.7

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080