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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37511140_37511306_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

37511140 - 37511306

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TATTCTTGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AATTATTTAATA

Flanking Amino Acid:

IYTKDELDQICVPLFDGSCN

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

59.8

0.22

1.2

63.3

41.9

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

66.6

0.52

1.4

71.97

33.6

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080