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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37516678_37516845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37516678 - 37516845

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

AAATTAATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TATAAATTAATA

Flanking Amino Acid:

QLFVTVLLSNRCMVEAWSLL

Intron Amino Acid Position:

887

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

0.82

0.8

24.9

Major PPT

60.2

0.23

1.1

53.2

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

54.3

0.13

1.8

68.12

37.5

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080