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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37517216_37518819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37517216 - 37518819

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

LNQSMKVNLMHDCDSRLKER

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

79.8

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.2

0.66

78.4

39.4

Minor 5ss

43.1

-0.8

2.9

54.5

43.9

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080