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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37531429_37531895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37531429 - 37531895

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCCATACCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGAAT

U12 Branch Point Sequence:

TTTGCCATACCA

Flanking Amino Acid:

SSISRIVKEPELPSKEEEDT

Intron Amino Acid Position:

2180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

55.1

0.13

1.4

64.3

39.7

Major PPT

61.2

0.25

0.9

54.4

34.9

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

57.3

0.22

76.13

41.2

Associated Gene:

Gene:

AHCTF1

Ensembl Gene ID:

ENSAPLG00000005120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005355

37488090 - 37533169

45080