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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37695994_37697131_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37695994 - 37697131

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGAC

5'SS Class:

major

3'SS Sequence:

TTTTTCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TGTTAATTATCT

Flanking Amino Acid:

RLAGRIVFKLLRQSVCISER

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

71.3

32.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

90.4

0.91

0.6

85.1

22.6

Minor 5ss

34.8

-1.7

3.2

45.1

38.2

Minor BPS

54.5

0.22

2.1

79.48

41.8

Associated Gene:

Gene:

SMYD3

Ensembl Gene ID:

ENSAPLG00000028273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026512

37687293 - 37745142

57850

ENSAPLT00000040651

37687293 - 37716091

28799

ENSAPLT00000025073

37687293 - 38035285

347993

ENSAPLT00000037604

37686834 - 37713848

27015

ENSAPLT00000015105

37687293 - 37703325

16033

ENSAPLT00000036973

37687293 - 37826916

139624

ENSAPLT00000028514

37687293 - 37901035

213743

ENSAPLT00000042439

37686834 - 37704036

17203