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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37697190_37702113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37697190 - 37702113

Intron Length:

4924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTCCCCTTAAG

Flanking Amino Acid:

RLYSFSDLQSNTEQLSEEMK

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

66.1

0.36

68.6

32.2

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

45.7

-0.4

2.1

56.52

43.8

Associated Gene:

Gene:

SMYD3

Ensembl Gene ID:

ENSAPLG00000028273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026512

37687293 - 37745142

57850

ENSAPLT00000040651

37687293 - 37716091

28799

ENSAPLT00000025073

37687293 - 38035285

347993

ENSAPLT00000037604

37686834 - 37713848

27015

ENSAPLT00000015105

37687293 - 37703325

16033

ENSAPLT00000036973

37687293 - 37826916

139624

ENSAPLT00000028514

37687293 - 37901035

213743

ENSAPLT00000042439

37686834 - 37704036

17203