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Intron Name: Anas_platyrhynchos_platyrhynchos_3_37954648_37962408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

37954648 - 37962408

Intron Length:

7761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTACACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AACATACTAACT

Flanking Amino Acid:

SVREIQIGEELTISYIESLM

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

61.9

0.27

54.6

39.7

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

45.9

-0.2

1.9

62.26

Associated Gene:

Gene:

SMYD3

Ensembl Gene ID:

ENSAPLG00000028273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025073

37687293 - 38035285

347993