Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_38153593_38218705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38153593 - 38218705

Intron Length:

65113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTAGCTTACTC

Flanking Amino Acid:

GTSVAASFFARAAQKLNLSS

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

88.7

0.87

0.6

84.5

23.5

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

53.5

0.09

2.1

70.67

41.2

Associated Gene:

Gene:

KIF26B

Ensembl Gene ID:

ENSAPLG00000012419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027713

38053508 - 38279944

226437

ENSAPLT00000023382

38053508 - 38337902

284395

ENSAPLT00000012939

38053508 - 38337902

284395