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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38248441_38279875_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
38248441 - 38279875

Intron Length:
31435

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGTCTG

5'SS Class:
major

3'SS Sequence:
GTTTGCTCTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTCT

U12 Branch Point Sequence:
CCTCCCTTCTCT

Flanking Amino Acid:
ALSCSRLNRADPCFSSVIHD

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
66.8
44.5

Major BPS
35.1
-0.9
4.2
63.7
43.9

Major PPT
77.2
0.61
0.8
74.4
36.5

Minor 5ss
40
-1.1
3
56
42.1

Minor BPS
41.5
-0.5
3.6
68.82
47.8

Associated Gene:

Gene:
KIF26B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

38053508 - 38279944
226437