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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38366820_38371116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38366820 - 38371116

Intron Length:

4297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAAA

5'SS Class:

major

3'SS Sequence:

CTTGTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TTGTTCTTACAG

Flanking Amino Acid:

DHECNKTVDVREIGPIVRSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

77.1

32.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

85.9

0.81

0.8

79.9

32.2

Minor 5ss

37.5

-1.4

2.4

42.6

44.3

Minor BPS

56.4

0.06

1.8

63.83

44.2

Associated Gene:

Gene:

EFCAB2

Ensembl Gene ID:

ENSAPLG00000012390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012893

38358791 - 38389495

30705