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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38371202_38389410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38371202 - 38389410

Intron Length:

18209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGCG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTTTTTCTATGT

Flanking Amino Acid:

AMAEQEGNGEDGAVAEIEKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

41.7

Major BPS

73.8

0.59

1.3

72.8

Major PPT

95.4

1.02

0.5

91.9

18.9

Minor 5ss

29.1

-2.4

3.4

30.6

42.7

Minor BPS

45.3

-0.2

2.1

67.24

44.2

Associated Gene:

Gene:

EFCAB2

Ensembl Gene ID:

ENSAPLG00000012390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012893

38358791 - 38389495

30705