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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38397288_38403906_R

Intron Information:

Intron Rank:

129123

Intron Class:

major

Intron Phase:

Intron Coordinates:

38397288 - 38403906

Intron Length:

6619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

AAAACCAGACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

77.7

31.1

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

89.6

0.89

0.6

84.8

Minor 5ss

41.5

-0.9

2.7

54.2

42.9

Minor BPS

41.9

-0.5

1.8

55.7

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016663

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027537

38394641 - 38404138

9498