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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38411249_38411338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38411249 - 38411338

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGA

5'SS Class:

major

3'SS Sequence:

TCCCTTTGTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

CCTCCTCTAACC

Flanking Amino Acid:

FEYIEENKYSRAKSPQPPVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

42.4

Major BPS

72.3

0.55

73.3

28.9

Major PPT

80.4

0.68

0.9

79.5

32.5

Minor 5ss

34.1

-1.8

3.6

47.1

48.3

Minor BPS

55.1

0.14

1.7

64.24

41.6

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012794

38409766 - 38422045

12280

ENSAPLT00000012801

38410037 - 38422045

12009