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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38411413_38413685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38411413 - 38413685

Intron Length:

2273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAATA

Flanking Amino Acid:

FDDTVVCLDTYNCDLHFKIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.9

35.4

Minor 5ss

33.2

-1.9

2.8

42.7

38.4

Minor BPS

74.3

0.76

1.5

84.09

29.2

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012801

38410037 - 38422045

12009

ENSAPLT00000012794

38409766 - 38422045

12280