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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38413826_38415318_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38413826 - 38415318

Intron Length:

1493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

AATTTAAAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TATGCATTAACT

Flanking Amino Acid:

SKGKVCFEMKVTEKIPVKHL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.1

30.7

Major BPS

81.6

0.78

0.8

24.9

Major PPT

55.7

0.13

1.1

50.5

41.3

Minor 5ss

34.1

-1.8

2.8

39.6

46.4

Minor BPS

0.74

1.7

86.69

38.7

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012801

38410037 - 38422045

12009

ENSAPLT00000012794

38409766 - 38422045

12280

ENSAPLT00000036607

38410037 - 38422045

12009