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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38416619_38417051_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38416619 - 38417051

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

GTCTGCAAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGTCTGCAAAA

Flanking Amino Acid:

DENDVIGCFANFDGDEVELS

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

77.9

0.69

0.8

75.9

Major PPT

58.2

0.18

1.1

40.8

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

46.9

-0.2

2.2

64.52

42.1

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012794

38409766 - 38422045

12280

ENSAPLT00000036607

38410037 - 38422045

12009

ENSAPLT00000012801

38410037 - 38422045

12009