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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38417316_38417542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38417316 - 38417542

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCGTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

AGTATCTCAAAT

Flanking Amino Acid:

KGPEQKKDCEVVMMIGLPGA

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.7

1.12

0.6

91.3

19.2

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

62.9

0.29

57.8

37.4

Minor 5ss

44.8

-0.6

2.8

61.1

43.8

Minor BPS

52.3

0.15

1.7

69.77

40.3

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012801

38410037 - 38422045

12009

ENSAPLT00000012794

38409766 - 38422045

12280

ENSAPLT00000036607

38410037 - 38422045

12009