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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38418256_38418624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38418256 - 38418624

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAGCT

5'SS Class:

major

3'SS Sequence:

GCATTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

AGTTACTGCATT

Flanking Amino Acid:

RKKRNFILDQTNVSAAAQRR

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

65.8

38.4

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

82.8

0.74

0.9

80.4

36.9

Minor 5ss

-2.2

3.7

47.8

47.9

Minor BPS

47.5

-0.1

2.1

69.33

41.3

Associated Gene:

Gene:

HNRNPU

Ensembl Gene ID:

ENSAPLG00000012268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036607

38410037 - 38422045

12009

ENSAPLT00000012801

38410037 - 38422045

12009

ENSAPLT00000012794

38409766 - 38422045

12280