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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38525177_38526037_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
38525177 - 38526037

Intron Length:
861

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTGAGCACT

5'SS Class:
major

3'SS Sequence:
TACTCTTTGCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATGAA

U12 Branch Point Sequence:
GCTCACGTAATA

Flanking Amino Acid:
IGAFPTEQNNETGELLQIRG

Intron Amino Acid Position:
364

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1
73.5
37

Major BPS
58.9
0.22
1
49.8
35.1

Major PPT
70.6
0.46
1
65.6
40.7

Minor 5ss
39
-1.2
3
54.7
42.4

Minor BPS
46.6
-0.2
2.1
58.44
41.2

Associated Gene:

Gene:
ADSS2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

38498556 - 38532445
33890

38498556 - 38534028
35473