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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38647393_38652959_R

Intron Information:

Intron Rank:

146283

Intron Class:

major

Intron Phase:

Intron Coordinates:

38647393 - 38652959

Intron Length:

5567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTCTCTGAGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTGTCACAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

70.3

40.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.32

1.1

60.4

39.5

Minor 5ss

38.3

-1.3

2.8

51.5

Minor BPS

48.5

-0.1

2.2

69.32

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047692

38646523 - 38653289

6767