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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_38801763_38803235_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
38801763 - 38803235
Intron Length:
1473

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTGAGAGTT
5'SS Class:
major
3'SS Sequence:
CTGTTCATGATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
CTGTTCATGATA
Flanking Amino Acid:
RTFHVDTPEEREEWTEAIQA
Intron Amino Acid Position:
95

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.71
0.9
75.4
34.4
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
65.7
0.35
1
62.1
38.7
Minor 5ss
31.4
-2.1
3.6
48.1
47.5
Minor BPS
51.6
0.04
1.6
62.02
38.8

Associated Gene:

Gene:
AKT3
Ensembl Gene ID:
ENSAPLG00000011477
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011990
38721942 - 38859638
137697