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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_38812136_38816629_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
38812136 - 38816629
Intron Length:
4494

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGGAAG
5'SS Class:
strong_major
3'SS Sequence:
TTTTATTTCTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
CTTACTTCAAAC
Flanking Amino Acid:
ILKKEVIIAKDEVAHTLTES
Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.1
0.94
0.8
78.6
37.2
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
89.3
0.89
0.7
88.4
28.3
Minor 5ss
31.6
-2.1
3.1
38.7
46.6
Minor BPS
53
0.07
1.7
64.63
40.8

Associated Gene:

Gene:
AKT3
Ensembl Gene ID:
ENSAPLG00000011477
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011990
38721942 - 38859638
137697