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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_38843316_38845983_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
38843316 - 38845983
Intron Length:
2668

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GCG|GTAAGTAAA
5'SS Class:
strong_major
3'SS Sequence:
ATTCTCTCTTTAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
ATTTTTTAAATT
Flanking Amino Acid:
SGLLIKDPNKRLGGGPDDAK
Intron Amino Acid Position:
388

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
88.6
0.91
0.9
83.6
29.8
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
80.4
0.68
0.7
78.5
29.6
Minor 5ss
35.5
-1.6
2.7
43.1
43.9
Minor BPS
65.1
0.55
1.6
81.14
35.2

Associated Gene:

Gene:
AKT3
Ensembl Gene ID:
ENSAPLG00000011477
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011990
38721942 - 38859638
137697