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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_38855647_38857829_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
38855647 - 38857829
Intron Length:
2183

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAT|GTAAGTCAA
5'SS Class:
strong_major
3'SS Sequence:
TGCCTTAATACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTGAA
U12 Branch Point Sequence:
TCTGCCTTAATA
Flanking Amino Acid:
QTITITPPEKYDEDGMDCMD
Intron Amino Acid Position:
452

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.2
0.78
1
76.2
34.7
Major BPS
87.2
0.92
0.8
77.7
37.1
Major PPT
71.7
0.49
1
65.7
39
Minor 5ss
36
-1.6
3
45.7
42.5
Minor BPS
76.5
0.83
1.3
78.78
38.5

Associated Gene:

Gene:
AKT3
Ensembl Gene ID:
ENSAPLG00000011477
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011990
38721942 - 38859638
137697