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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38868993_38870168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38868993 - 38870168

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTGCATATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

AACTCTGCAATT

Flanking Amino Acid:

IQKKEEEREIEKKWDADLKQ

Intron Amino Acid Position:

755

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

82.6

29.6

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

77.5

0.62

0.9

74.2

39.9

Minor 5ss

41.2

-1

2.8

Minor BPS

46.2

-0.2

2.1

63.26

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048051

38863976 - 38972542

108567

ENSAPLT00000046618

38863976 - 38972542

108567

ENSAPLT00000041402

38863976 - 38972542

108567

ENSAPLT00000011562

38863976 - 38969000

105025