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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38946494_38947630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38946494 - 38947630

Intron Length:

1137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ACTTCTGAAACA

Flanking Amino Acid:

LASHETEMNKTGLMGGCSHP

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.7

0.78

0.9

41.9

Minor 5ss

41.6

-0.9

3.2

56.4

Minor BPS

48.4

-0.1

2.3

64.77

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041402

38863976 - 38972542

108567

ENSAPLT00000033852

38863976 - 38972542

108567