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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38950144_38953443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38950144 - 38953443

Intron Length:

3300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCTTTTTTATTT

Flanking Amino Acid:

AEEANLEKTKALVQCEQLKS

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.6

0.71

87.1

30.6

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

57.3

0.31

1.6

70.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033852

38863976 - 38972542

108567

ENSAPLT00000048051

38863976 - 38972542

108567

ENSAPLT00000011562

38863976 - 38969000

105025

ENSAPLT00000046618

38863976 - 38972542

108567

ENSAPLT00000043160

38877286 - 38972542

95257

ENSAPLT00000041402

38863976 - 38972542

108567