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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38957685_38959044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38957685 - 38959044

Intron Length:

1360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGTATT

5'SS Class:

major

3'SS Sequence:

ATCTTTCCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAAGAA

U12 Branch Point Sequence:

TCTTTCCTAAAG

Flanking Amino Acid:

GEIEKWHVELEKLKLLYQEK

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

75.6

39.9

Major BPS

46.7

-0.2

0.9

39.1

Major PPT

71.5

0.49

71.7

32.6

Minor 5ss

36.8

-1.5

3.1

49.3

41.1

Minor BPS

0.05

1.9

64.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033852

38863976 - 38972542

108567

ENSAPLT00000048051

38863976 - 38972542

108567

ENSAPLT00000011562

38863976 - 38969000

105025

ENSAPLT00000046618

38863976 - 38972542

108567

ENSAPLT00000043160

38877286 - 38972542

95257

ENSAPLT00000041402

38863976 - 38972542

108567