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Intron Name: Anas_platyrhynchos_platyrhynchos_3_38959186_38959477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

38959186 - 38959477

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGGTTT

5'SS Class:

major

3'SS Sequence:

ATTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATTT

Flanking Amino Acid:

LREQTLLDASANTQNSWPAG

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

73.6

37.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.1

0.77

0.8

82.9

32.8

Minor 5ss

44.9

-0.6

3.4

70.1

41.4

Minor BPS

60.2

0.4

1.5

74.31

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033852

38863976 - 38972542

108567

ENSAPLT00000048051

38863976 - 38972542

108567

ENSAPLT00000011562

38863976 - 38969000

105025

ENSAPLT00000046618

38863976 - 38972542

108567

ENSAPLT00000043160

38877286 - 38972542

95257

ENSAPLT00000041402

38863976 - 38972542

108567