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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39009797_39011857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39009797 - 39011857

Intron Length:

2061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGCAAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EALKSEEKSIDLSAMPRGTP

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

48.1

-0.1

1.3

54.5

39.1

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019365

38994129 - 39068728

74600

ENSAPLT00000011040

38994129 - 39068728

74600

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000023678

38994129 - 39068728

74600