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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39011993_39020175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39011993 - 39020175

Intron Length:

8183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EEKMHETGASGCSTDAKQAE

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000019365

38994129 - 39068728

74600

ENSAPLT00000011040

38994129 - 39068728

74600