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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39023753_39034312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39023753 - 39034312

Intron Length:

10560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTGTTTCATT

Flanking Amino Acid:

EMEARKMIDKVFGVDDSQDY

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.7

0.78

0.8

81.6

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

51.6

0.13

2.2

75.88

41.7

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011040

38994129 - 39068728

74600

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000023678

38994129 - 39068728

74600

ENSAPLT00000019365

38994129 - 39068728

74600