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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39023753_39040610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39023753 - 39040610

Intron Length:

16858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGCTTTATCT

Flanking Amino Acid:

EMEARKMIDKEGSPAPGSKR

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.3

0.64

0.8

77.9

30.6

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

63.4

0.5

1.7

79.06

43.7

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038358

38994129 - 39068835

74707