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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39040738_39044279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39040738 - 39044279

Intron Length:

3542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

TTCTCATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GGTTTCTTAGCT

Flanking Amino Acid:

ESPVPAPLENDTDISESGIS

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.1

61.2

39.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

87.1

0.83

0.7

84.9

28.6

Minor 5ss

32.3

-2

3.1

40.6

45.4

Minor BPS

68.5

0.66

1.6

81.46

39.8

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011040

38994129 - 39068728

74600

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000023678

38994129 - 39068728

74600

ENSAPLT00000019365

38994129 - 39068728

74600