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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39046104_39050076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39046104 - 39050076

Intron Length:

3973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACAAATTAACA

Flanking Amino Acid:

SLASAHNSPSEKPKLLPDPD

Intron Amino Acid Position:

1257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.8

0.56

69.4

40.3

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

51.5

0.04

1.8

64.04

41.4

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000011040

38994129 - 39068728

74600