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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39046104_39051683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39046104 - 39051683

Intron Length:

5580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TAAACTAATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

SLASAHNSPSVSARWRRFPT

Intron Amino Acid Position:

1283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.1

0.23

56.8

42.9

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000023678

38994129 - 39068728

74600

ENSAPLT00000019365

38994129 - 39068728

74600