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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39050128_39051683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39050128 - 39051683

Intron Length:

1556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGAGTAC

5'SS Class:

major

3'SS Sequence:

TAAACTAATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

DPDPDVETYSVSARWRRFPT

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.1

37.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.1

0.23

56.8

42.9

Minor 5ss

35.1

-1.7

3.6

45.5

45.4

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000011040

38994129 - 39068728

74600