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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39051919_39056195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39051919 - 39056195

Intron Length:

4277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

TCTTTATTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTTATTACTA

Flanking Amino Acid:

DWTAHREEIARISQDLALIA

Intron Amino Acid Position:

1352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

76.5

0.6

0.9

71.2

38.6

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

53.2

0.1

1.9

67.42

39.7

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023678

38994129 - 39068728

74600

ENSAPLT00000019365

38994129 - 39068728

74600

ENSAPLT00000011040

38994129 - 39068728

74600

ENSAPLT00000048079

38994129 - 39068835

74707

ENSAPLT00000038358

38994129 - 39068835

74707