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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39056374_39057806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39056374 - 39057806

Intron Length:

1433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTTTCT

5'SS Class:

major

3'SS Sequence:

CTTTATTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

VGDLHGEMHKLVDRVFDESL

Intron Amino Acid Position:

1421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.2

66.5

39.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

85.3

0.79

0.8

77.2

36.7

Minor 5ss

38.2

-1.3

2.9

52.3

44.1

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019365

38994129 - 39068728

74600