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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39057975_39058248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39057975 - 39058248

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

AAACTTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TCTTACTTAAAA

Flanking Amino Acid:

TRRRTWSRDEVMGDSLLLSS

Intron Amino Acid Position:

1458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.5

28.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

70.5

0.46

63.3

41.8

Minor 5ss

32.3

-2

2.6

35.1

34.3

Minor BPS

69.8

0.62

1.6

77.86

38.5

Associated Gene:

Gene:

CEP170

Ensembl Gene ID:

ENSAPLG00000010551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038358

38994129 - 39068835

74707

ENSAPLT00000023678

38994129 - 39068728

74600

ENSAPLT00000019365

38994129 - 39068728

74600

ENSAPLT00000011040

38994129 - 39068728

74600

ENSAPLT00000048079

38994129 - 39068835

74707