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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39078182_39100468_F

Intron Information:

Intron Rank:

149191

Intron Class:

major

Intron Phase:

Intron Coordinates:

39078182 - 39100468

Intron Length:

22287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TTCCACATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TTTTCTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

76.7

0.6

0.9

34.7

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

61.7

0.36

79.34

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040678

39078089 - 39112321

34233