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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39100540_39112138_F

Intron Information:

Intron Rank:

149192

Intron Class:

major

Intron Phase:

Intron Coordinates:

39100540 - 39112138

Intron Length:

11599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.8

37.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

78.5

0.64

79.2

32.5

Minor 5ss

32.4

-2

3.1

39.7

40.1

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040678

39078089 - 39112321

34233