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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39305676_39339403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39305676 - 39339403

Intron Length:

33728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TATCTATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TTTTCCTTATCT

Flanking Amino Acid:

LSEKNCQNNCRVALVENIPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

70.2

40.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

0.67

0.8

77.6

35.3

Minor 5ss

32.6

-2

3.5

48.2

47.4

Minor BPS

85.6

1.19

1.4

100.1

28.3

Associated Gene:

Gene:

PLD5

Ensembl Gene ID:

ENSAPLG00000015142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037359

39272308 - 39411447

139140

ENSAPLT00000015784

39271573 - 39411447

139875

ENSAPLT00000015780

39264361 - 39411447

147087