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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39451149_39451244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39451149 - 39451244

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

TCATTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

AAAACCACAACT

Flanking Amino Acid:

VMIHTGKVYLLAIHDVTPKV

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

67.7

39.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.9

0.76

0.8

81.3

30.5

Minor 5ss

36.9

-1.5

51.4

45.2

Minor BPS

0.01

1.9

67.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035876

39448077 - 39453507

5431

ENSAPLT00000026405

39449261 - 39453507

4247