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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39460395_39460934_R

Intron Information:

Intron Rank:

133312

Intron Class:

major

Intron Phase:

Intron Coordinates:

39460395 - 39460934

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTACCTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

GTTTTTGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.5

0.44

1.1

68.8

36.7

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

49.3

0.03

2.2

75.46

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041672

39460112 - 39461913

1802