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Intron Name: Anas_platyrhynchos_platyrhynchos_3_39475505_39476389_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39475505 - 39476389

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGC

5'SS Class:

major

3'SS Sequence:

CCTCTTCAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CCCTCTTCAATT

Flanking Amino Acid:

LTMTQFITIIRSRMALTATQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

60.1

41.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

66.8

0.38

0.9

67.1

Minor 5ss

37.4

-1.4

3.3

49.7

46.9

Minor BPS

57.1

0.3

1.6

67.06

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044704

39475087 - 39476597

1511